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Notable former players at 06-Aug-13 Include only Europeans teams
| | Player | On this club | Pos | Teams | |
 | Allan Kardeck | 2008 - 2011 | FW |  Hibernian,  Metapán, | |
 | Arzú, J | 1990 | GK |  R.Santder, | |
| Caballero, Samuel | 1996 - 2001 | DF |  Nacional,  Salerntna, Udinese,  Chicago,  Yatai, | |
| Castro, M | 2007 - 2008 | MF | Unattached, N England, | |
| Coito, F | 1994 - 1995 | DF | Cerro, Wanderers,  Osorno, | |
 | Copete | 2010 - 2012 | FW |  Xelajú, | |
| de León, Julio | 2001 - 2002 | MF | Reggina, Torino, Samb, Shandong, Parma, Catanzaro, Teramo, Genoa, Fiorentina, Avellino, | |
| Ferreira, E | 2005 - 2006 | FW |  Puebla, |  |
| Figueroa, M | 2003 - 2007 | DF |  Wigan, FC Dallas, Colorado, Hull City, Houston, | |
| García, Boniek | 2007 - 2012 | MF | Houston, | |
| García, JC (1988) | 2010 - 2013 | DF | Wigan, Tenerife, | |
| López, A | 2010 - 2013 | MF |  Alaj ense,  Khaleej, Houston, | |
| Luciano Emilio | 2012 | FW | Catanduve, Danubio, Barbarens, T Neza, Branco SP,  Aachen, Atlante, DC United, Köln, Querétaro, | |
| Mejía, Juan | 2011 - 2013 | FW | Malaca, | |
| Núñez | 2008 | MF | Unattached, Cruz Azul, FC Dallas, Ft. Laud, Puebla, Scunthorp, Alaj ense, Chivas USA, Leeds, | |
| Palacios, Jerry | 2001 - 2005 | FW | Zhejiang,  Bandits, Hunan, Alaj ense, |  |
| Palacios, W | 2002 | MF | Wigan, Birminghm, Stoke City, Tottenham, | |
| Rosano | 2012 - 2013 | MF |  Tigre, Unattached, Cagliari, Peñarol, Wanderers, Racing, Juventud, | |
| Silva, N | 2008 | FW | Millos, Juventud, Progreso, Racing, Tacrembo, Danubio, Liverpool, |  |
| Suazo | 1996 - 1999 | FW | Genoa,  Benfica, Catania, Inter, Unattached, Cagliari, | |
| Suazo, M | 2002 - 2003 | MF | Köln,  Antalya,  Brann,  Salzburg, | |
| Thomas, H | 2001 - 2009 | MF | Wigan, FC Dallas, Colorado, | |
| Turcios | 2008 - 2012 | MF | Atlanta, | |
| Yearwood, G | 1986 - 1988 | DF | Valladlid, Elche, Celta, Tenerife, | |
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